Dataset Search

This dataset contains MRI data and Imaris modeling analysis of CLARITY-cleared, immunostained tissue associated with a study that assessed the effects of lipid blends containing various levels of a hydrolyzed fat system on myelin development in healthy neonatal piglets. Data are from thirty-two piglets of mixed sexes across four diet treatment groups and includes a sow-fed reference group. MRI data (presented in Figure 2 of the associated article) consists of volumetric data from Voxel-Based Morphometry analysis in brain grey matter and white matter, as well as mean fractional anisotropy and mean orientation dispersion index data from Tract-Based Spatial Statistics analysis. Imaris data (presented in Figure 3 of the associated article) consists of twenty-one select output measures from 3D modeling analysis of PLP-stained prefrontal cortex tissue. All methods used for collection/generation/processing of data are described in the associated article: Louie AY, Rund LA, Komiyama-Kasai KA, Weisenberger KE, Stanke KL, Larsen RJ, Leyshon BJ, Kuchan MJ, Das T, Steelman AJ. A hydrolyzed lipid blend diet promotes myelination in neonatal piglets in a region and concentration-dependent manner. J Neurosci Res. 2023.

Sugarcane, a tropical C4 grass in the genus Saccharum (Poaceae), accounts for nearly 80% of sugar produced worldwide and is also an important feedstock for biofuel production. Generating transgenic sugarcane with predictable and stable transgene expression is critical for crop improvement. In this study, we generated a highly expressed single copy locus as landing pad for transgene stacking. Transgenic sugarcane lines with stable integration of a single copy nptII expression cassette flanked by insulators supported higher transgene expression along with reduced line to line variation when compared to single copy events without insulators by NPTII ELISA analysis. Subsequently, the nptII selectable marker gene was efficiently excised from the sugarcane genome by the FLPe/FRT site-specific recombination system to create selectable marker free plants. This study provides valuable resources for future gene stacking using site-specific recombination or genome editing tools.

This dataset enumerates the number of geocoded tweets captured in geographic rectangular bounding boxes around the metropolitan statistical areas (MSAs) defined for 49 American cities, during a four-week period in 2012 (between April and June), through the Twitter Streaming API. More information on MSA definitions: https://www.census.gov/population/metro/

Datasets used in the study, "Optimal completion of incomplete gene trees in polynomial time using OCTAL," presented at WABI 2017.

Raw MD simulation trajectory, input and configuration files, SEM current data, and experimental raw data accompanying the publication, "Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore". README.md contains a description of all associated files.

This dataset contains records of five years of interlibrary loan (ILL) transactions for the University of Illinois at Urbana-Champaign Library. It is for the materials lent to other institutions during period 2009-2013. It includes 169,890 transactions showing date; borrowing institution’s type, state and country; material format, imprint city, imprint country, imprint region, call number, language, local circulation count, ILL lending count, and OCLC holdings count. The dataset was generated putting together monthly ILL reports. Circulation and ILL lending fields were added from the ILS records. Borrower region and imprint region fields are created based on Title VI Region List. OCLC holdings field has been added from WorldCat records.

The associated data sets include information on stable isotopes from organic matter sources in high elevation lakes, the percentage of production assimilated from the different sources of organic matter, and the relationship between different metrics for trophic position and environmental variables.

Data from an a field survey at Nikko National Park in central Japan. Data contain information about deer carcass, environment of sites, and vertebrate scavenging.

GBS data from diverse sorghum lines. Project funded by DOE, ARPA-E, and startup funds to PJ Brown.

Dataset associated with Allen et al. (In Review): Food caching by a solitary large carnivore supports optimal foraging theory If using this dataset, please cite this manuscript.

This data set includes all of data related to strain-resilient FETs based on 2D heterostructures including optical images of FETs, Raman characteristics data, Transport measurement data, and AFM topography data.

This dataset includes early embryogenesis and post-embryonic development of Soybean cyst nematode.

This dataset contains collected and aggregated network information from NCSA’s Blue Waters system, which is comprised of 27,648 nodes connected via Cray Gemini* 3D torus (dimension 24x24x24) interconnect, from Jan/01/2017 to May/31/2017. Network performance counters for links are exposed via Cray's gpcdr (<a href="https://github.com/ovis-hpc/ovis/wiki/gpcdr-kernel-module">https://github.com/ovis-hpc/ovis/wiki/gpcdr-kernel-module</a>) kernel module. Lightweight Distributed Metric Service ([LDMS](<a href="https://github.com/ovis-hpc/ovis">https://github.com/ovis-hpc/ovis</a>)) is used to sampled the performance counters at 60 second intervals. Please read "README.md" file. <b>Acknowledgement:</b> This dataset is collected as a part of the Blue Waters sustained-petascale computing project, which is supported by the National Science Foundation and the state of Illinois. Blue Waters is a joint effort of the University of Illinois at Urbana-Champaign and its National Center for Supercomputing Applications.

Mist netting data for little brown bats (Myotis lucifugus) in McHenry County, Illinois and output of acoustic data processed using Kaleidoscope (Version 5.1.9, Bats of North America 5.1.0; Wildlife Acoustics) auto-identification software. Associated survey metadata and landcover metrics calculated using Fragstats included.

This dataset is the numerical simulation data of the computational study of the cold front-related hydrodynamics in the Wax Lake delta. The numerical model used is ECOM-si.

GBS data from biparental sorghum populations provided by Dr. Bill Rooney, TAMU. Data produced and analyzed by Pradeep Hirannaiah to study recombination in sorghum. Funding for this study was provided by the Sorghum Checkoff.

This is a sample 5 minute video of an E coli bacterium swimming in a microfluidic chamber as well as some supplementary code files to be used with the Matlab code available at https://github.com/dfraebel/CellTracking

Data (fish growth, prey responses) from a series of experiments examining interspecific interactions between native and invasive juvenile fishes.

Monthly water withdrawal records (total pumpage and per-capita consumption) for the City of Austin, Texas (2000-2014). Data were provided by Austin Water Utility.

A 3D CNN method to land cover classification using LiDAR and multitemporal imagery

This is the data set associated with the manuscript titled "Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event." Included are the gene alignments used for phylogenetic analyses and the cophylogenetic input files.

This dataset includes both meteorology and oceanography data collected at stations (CSI03, CSI06, and CSI09) near the Gulf of Mexico from the LSU WAVCIS (Waves-Current-Surge Information System) lab. The associated data analysis visualization is also saved in separate directories.

This dataset is the field measurements of water depth at the Wax Lake delta conducted in late 2012.

GBS data from diverse sorghum lines. Project funded by DOE, ARPA-E, and startup funds to PJ Brown.