Data for changes in neuropeptide prohormone genes among Cetartio-dactyla livestock and wild species associated with evolution and domestication
Dataset Description |
This dataset contain information for the paper "Changes in neuropeptide prohormone genes among Cetartio-dactyla livestock and wild species associated with evolution and domestication" Veterinary Sciences, MDPI. Protein sequences were predicted using GeneWise for 98 neuropeptide prohormone genes from publicly available genomes of 118 Cetartiodactyla species. All predictions (CetartiodactylaSequences2022.zip) were manually verified. Sequences were aligned within each prohormone using MAFFT (MDPImultalign2022.zip includes multiple sequence alignment of all species available for each prohormone). Phylogenetic gene trees were constructed using PhyML and the species tree was constructed using ASTRAL (MDPItree2022.zip). The data is released under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0). |
Subject |
Life Sciences |
Keywords |
prohormone; neuropeptide; Cetartiodactyla; Cetartiodactyla; phylogenetics; gene tree; species tree |
License |
See license.txt file in dataset. |
Funder |
U.S. National Institutes of Health (NIH)-Grant:P30 DA018310 |
Corresponding Creator |
Bruce Southey |
Downloaded |
558 times |
| Version | DOI | Comment | Publication Date |
|---|---|---|---|
| 1 | 10.13012/B2IDB-2071917_V1 | 2022-06-01 |
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